Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AK4P3-201ENST00000418260 669 ntBASIC16.94■□□□□ 0.3
UPK1AO00322 AC104076.2-201ENST00000448912 469 ntBASIC16.94■□□□□ 0.3
UPK1AO00322 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.94■□□□□ 0.3
UPK1AO00322 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.94■□□□□ 0.3
UPK1AO00322 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.94■□□□□ 0.3
UPK1AO00322 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.94■□□□□ 0.3
UPK1AO00322 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
UPK1AO00322 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UPK1AO00322 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK1AO00322 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
UPK1AO00322 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK1AO00322 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
UPK1AO00322 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
UPK1AO00322 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK1AO00322 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
UPK1AO00322 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
UPK1AO00322 HLA-F-220ENST00000434407 884 ntBASIC16.93■□□□□ 0.3
UPK1AO00322 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 HOMER2P1-201ENST00000455653 964 ntBASIC16.93■□□□□ 0.3
UPK1AO00322 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.93■□□□□ 0.3
UPK1AO00322 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK1AO00322 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.93■□□□□ 0.3
UPK1AO00322 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
UPK1AO00322 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK1AO00322 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.93■□□□□ 0.3
UPK1AO00322 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1AO00322 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK1AO00322 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UPK1AO00322 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1AO00322 AL121761.2-201ENST00000598007 1648 ntBASIC16.92■□□□□ 0.3
UPK1AO00322 AL355312.1-201ENST00000407115 2176 ntBASIC16.92■□□□□ 0.3
UPK1AO00322 AL118508.1-201ENST00000613502 2345 ntBASIC16.92■□□□□ 0.3
UPK1AO00322 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1AO00322 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
UPK1AO00322 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK1AO00322 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1AO00322 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1AO00322 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.92■□□□□ 0.3
UPK1AO00322 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UPK1AO00322 KRT18P38-201ENST00000449496 1282 ntBASIC16.92■□□□□ 0.3
UPK1AO00322 AC092597.1-201ENST00000487352 616 ntBASIC16.92■□□□□ 0.3
UPK1AO00322 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1AO00322 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.92■□□□□ 0.3
UPK1AO00322 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.92■□□□□ 0.3
UPK1AO00322 RN7SL850P-201ENST00000579959 291 ntBASIC16.92■□□□□ 0.3
UPK1AO00322 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.92■□□□□ 0.3
UPK1AO00322 AC024563.2-201ENST00000603282 481 ntBASIC16.92■□□□□ 0.3
UPK1AO00322 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.92■□□□□ 0.3
UPK1AO00322 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1AO00322 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1AO00322 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UPK1AO00322 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1AO00322 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1AO00322 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UPK1AO00322 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1AO00322 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UPK1AO00322 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.91■□□□□ 0.3
UPK1AO00322 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UPK1AO00322 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1AO00322 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1AO00322 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UPK1AO00322 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.91■□□□□ 0.3
UPK1AO00322 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.91■□□□□ 0.3
UPK1AO00322 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.91■□□□□ 0.3
UPK1AO00322 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1AO00322 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UPK1AO00322 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UPK1AO00322 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1AO00322 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UPK1AO00322 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1AO00322 LINC00167-201ENST00000530583 1419 ntBASIC16.91■□□□□ 0.3
UPK1AO00322 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1AO00322 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.91■□□□□ 0.3
UPK1AO00322 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.91■□□□□ 0.3
UPK1AO00322 AL359075.1-203ENST00000462729 1002 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms