Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 AC009949.1-201ENST00000623048 1830 ntBASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MBD3L4A6NDZ8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 KLF4P1-201ENST00000412782 1185 ntBASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 KRT18P27-201ENST00000427733 1299 ntBASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 RNA5SP415-201ENST00000517246 115 ntBASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 Z83851.2-201ENST00000609564 659 ntBASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 AL589182.2-201ENST00000619332 1049 ntBASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 AP002414.3-201ENST00000589352 1468 ntBASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 FLJ13224-201ENST00000313737 1514 ntBASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MBD3L4A6NDZ8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 AC004817.3-201ENST00000602957 2129 ntBASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 POLD2P1-201ENST00000511220 997 ntBASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 AC034105.1-201ENST00000563488 319 ntBASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 TERC-201ENST00000602385 541 ntBASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 MIR1199-201ENST00000621445 119 ntBASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 PGM5P2-202ENST00000637225 1043 ntBASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 PMS2P7-201ENST00000506558 1336 ntBASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MBD3L4A6NDZ8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MBD3L4A6NDZ8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
MBD3L4A6NDZ8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
MBD3L4A6NDZ8 AP000997.3-201ENST00000623333 2250 ntBASIC15.6■□□□□ 0.09
MBD3L4A6NDZ8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MBD3L4A6NDZ8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MBD3L4A6NDZ8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.6■□□□□ 0.09
MBD3L4A6NDZ8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MBD3L4A6NDZ8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MBD3L4A6NDZ8 KRT18P55-202ENST00000578578 1546 ntBASIC15.6■□□□□ 0.09
MBD3L4A6NDZ8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms