Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 KRT18P56-201ENST00000507275 550 ntBASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC4Q9Y5F7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 AL133373.2-201ENST00000623187 2828 ntBASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 IGHV3-47-201ENST00000425060 335 ntBASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 AC104819.1-201ENST00000504587 486 ntBASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 AC012615.1-201ENST00000565797 1299 ntBASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 MIR3652-201ENST00000579335 131 ntBASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 NSUN5P1-202ENST00000421140 1535 ntBASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 NSUN5P2-203ENST00000457352 1529 ntBASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGC4Q9Y5F7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 AC125634.1-201ENST00000438758 1403 ntBASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 MINOS1P3-201ENST00000457048 203 ntBASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGC4Q9Y5F7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGC4Q9Y5F7 AC009949.1-201ENST00000623048 1830 ntBASIC18.02■□□□□ 0.47
PCDHGC4Q9Y5F7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGC4Q9Y5F7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGC4Q9Y5F7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PCDHGC4Q9Y5F7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGC4Q9Y5F7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC4Q9Y5F7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGC4Q9Y5F7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms