Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 PRORSD1P-202ENST00000563365 2154 ntBASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 REXO1L9P-201ENST00000604264 2108 ntBASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHB3Q9Y5E6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 CHCHD2P8-201ENST00000429873 447 ntBASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 RN7SL510P-201ENST00000581311 263 ntBASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 LINC01711-201ENST00000598340 967 ntBASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB3Q9Y5E6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB3Q9Y5E6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHB3Q9Y5E6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHB3Q9Y5E6 FLJ13224-201ENST00000313737 1514 ntBASIC17.52■□□□□ 0.39
PCDHB3Q9Y5E6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 SIRPAP1-201ENST00000448467 1770 ntBASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 FAAHP1-202ENST00000446499 1238 ntBASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 KRT8P50-201ENST00000562022 1438 ntBASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 AP002414.4-201ENST00000589764 1148 ntBASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB3Q9Y5E6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 KRT18P1-202ENST00000452408 1331 ntBASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 NUS1P1-201ENST00000446295 882 ntBASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 AP003733.1-201ENST00000491725 852 ntBASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 AC098799.1-201ENST00000504752 800 ntBASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 RNF126P1-202ENST00000569893 925 ntBASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHB3Q9Y5E6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms