Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
HHLA3Q9XRX5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HHLA3Q9XRX5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
HHLA3Q9XRX5 KRT18P22-201ENST00000402024 1347 ntBASIC13.12□□□□□ -0.31
HHLA3Q9XRX5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HHLA3Q9XRX5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.12□□□□□ -0.31
HHLA3Q9XRX5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 AL499627.1-201ENST00000569373 2188 ntBASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 PCDH8P1-201ENST00000428983 2773 ntBASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 AL121761.2-201ENST00000598007 1648 ntBASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 AP000593.1-201ENST00000393668 712 ntBASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 UBALD1-205ENST00000590891 2641 ntBASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 KRT8P45-201ENST00000414328 1447 ntBASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HHLA3Q9XRX5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 ECEL1P2-202ENST00000465689 757 ntBASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 MYLKP1-201ENST00000509077 1580 ntBASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 AC036111.1-201ENST00000533973 1582 ntBASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HHLA3Q9XRX5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms