Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19■□□□□ 0.63
SALL4Q9UJQ4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SALL4Q9UJQ4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SALL4Q9UJQ4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19■□□□□ 0.63
SALL4Q9UJQ4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SALL4Q9UJQ4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19■□□□□ 0.63
SALL4Q9UJQ4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 ATP5G1P1-201ENST00000448724 379 ntBASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 AC104076.2-201ENST00000448912 469 ntBASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 ECEL1P2-202ENST00000465689 757 ntBASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 AC010203.1-204ENST00000548782 407 ntBASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SALL4Q9UJQ4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 DUX4L26-201ENST00000489078 1255 ntBASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 FAM87A-204ENST00000613235 858 ntBASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SALL4Q9UJQ4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.97■□□□□ 0.63
SALL4Q9UJQ4 AL157888.1-201ENST00000631930 593 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms