Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 AC004263.2-201ENST00000617183 678 ntBASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA9Q9UGM1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 AL031133.1-201ENST00000406807 723 ntBASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 KRT18P65-201ENST00000439811 1286 ntBASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 AL136038.3-201ENST00000561909 1096 ntBASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 AC005332.3-201ENST00000589904 676 ntBASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 AC022898.2-201ENST00000616822 1312 ntBASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 AL121956.5-201ENST00000625261 221 ntBASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHRNA9Q9UGM1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 AL353692.3-201ENST00000407031 1396 ntBASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 AC087388.1-201ENST00000571370 1112 ntBASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CHRNA9Q9UGM1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 Z83836.1-201ENST00000624605 1642 ntBASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms