Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 AC091304.2-201ENST00000564639 760 ntBASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
SPHK1Q9NYA1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SPHK1Q9NYA1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SPHK1Q9NYA1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SPHK1Q9NYA1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.21■□□□□ 0.34
SPHK1Q9NYA1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.21■□□□□ 0.34
SPHK1Q9NYA1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 AC010460.3-201ENST00000511359 1579 ntBASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 POM121L3P-201ENST00000419331 1163 ntBASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 AC009533.2-201ENST00000543664 586 ntBASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 AC114341.1-201ENST00000618070 349 ntBASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPHK1Q9NYA1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 AC009949.1-201ENST00000623048 1830 ntBASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 AC096633.1-201ENST00000422446 749 ntBASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 AC007967.3-201ENST00000434308 558 ntBASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 MIR5100-201ENST00000579544 119 ntBASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 IFNL4P1-201ENST00000607083 540 ntBASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 KRT18P55-202ENST00000578578 1546 ntBASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms