Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC25.41■■□□□ 1.66
SLC52A1Q9NWF4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC25.41■■□□□ 1.66
SLC52A1Q9NWF4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC25.41■■□□□ 1.66
SLC52A1Q9NWF4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SLC52A1Q9NWF4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SLC52A1Q9NWF4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 MIR770-201ENST00000390219 98 ntBASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 AC074386.1-202ENST00000463561 864 ntBASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 STK19B-204ENST00000512515 211 ntBASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 PC-208ENST00000529047 1607 ntTSL 3 BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SLC52A1Q9NWF4 AC009336.1-201ENST00000608941 1553 ntBASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 AC092364.2-202ENST00000597012 1073 ntBASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
SLC52A1Q9NWF4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SLC52A1Q9NWF4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC25.39■■□□□ 1.65
SLC52A1Q9NWF4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC25.39■■□□□ 1.65
SLC52A1Q9NWF4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SLC52A1Q9NWF4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
SLC52A1Q9NWF4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SLC52A1Q9NWF4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SLC52A1Q9NWF4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SLC52A1Q9NWF4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC25.39■■□□□ 1.65
SLC52A1Q9NWF4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SLC52A1Q9NWF4 AC025580.3-201ENST00000617932 1424 ntBASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 AC097637.2-201ENST00000624096 1997 ntBASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 AL139400.1-201ENST00000366220 510 ntBASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 TSEN15P1-201ENST00000423257 515 ntBASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 FAM58CP-201ENST00000435741 640 ntBASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 AL513210.1-201ENST00000629608 234 ntBASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 BX276092.7-203ENST00000637198 1536 ntBASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SLC52A1Q9NWF4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 LINC00982-205ENST00000420957 435 ntBASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 DDX43P3-201ENST00000441064 443 ntBASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms