Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 GNAS-203ENST00000306120 1878 ntBASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 AC006116.8-202ENST00000587620 1550 ntBASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 AC246785.2-201ENST00000432512 513 ntBASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 MTCL1P1-201ENST00000446207 792 ntBASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 TOB2P1-201ENST00000469761 992 ntBASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRDM9Q9NQV7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRDM9Q9NQV7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 AC112698.1-201ENST00000510299 916 ntBASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 Z69720.1-201ENST00000601483 472 ntBASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 AL353801.3-201ENST00000609898 542 ntBASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 LTB4R2-202ENST00000528054 3092 ntBASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 AC233702.3-201ENST00000578656 1387 ntBASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRDM9Q9NQV7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 KRT18P56-201ENST00000507275 550 ntBASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms