Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 FER1L4-210ENST00000615531 5998 ntBASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
THUMPD3Q9BV44 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
THUMPD3Q9BV44 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 SLC25A1P2-201ENST00000430693 912 ntBASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 C2orf69P3-201ENST00000565542 1120 ntBASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
THUMPD3Q9BV44 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 MMP23A-201ENST00000234610 1017 ntBASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 CCR12P-201ENST00000446203 998 ntBASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 TSPY17P-201ENST00000450329 467 ntBASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 AP003041.3-201ENST00000527151 707 ntBASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 AL023803.3-201ENST00000615559 522 ntBASIC17.09■□□□□ 0.33
THUMPD3Q9BV44 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms