Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VGLL1Q99990 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
VGLL1Q99990 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VGLL1Q99990 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VGLL1Q99990 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.58□□□□□ -0.24
VGLL1Q99990 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VGLL1Q99990 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.58□□□□□ -0.24
VGLL1Q99990 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.58□□□□□ -0.24
VGLL1Q99990 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 AC012618.2-201ENST00000428058 849 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 TSPY17P-201ENST00000450329 467 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 UBE2SP1-201ENST00000450587 669 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 AC009065.1-201ENST00000564055 1225 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 AL353719.1-201ENST00000566847 864 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 WWOX-216ENST00000569818 525 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 AC233702.5-201ENST00000584107 538 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
VGLL1Q99990 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.58□□□□□ -0.24
VGLL1Q99990 AC026471.5-201ENST00000615068 467 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 AC112497.1-201ENST00000624824 639 ntBASIC13.58□□□□□ -0.24
VGLL1Q99990 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.58□□□□□ -0.24
VGLL1Q99990 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.58□□□□□ -0.24
VGLL1Q99990 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
VGLL1Q99990 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VGLL1Q99990 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.58□□□□□ -0.24
VGLL1Q99990 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
VGLL1Q99990 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
VGLL1Q99990 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VGLL1Q99990 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.57□□□□□ -0.24
VGLL1Q99990 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.57□□□□□ -0.24
VGLL1Q99990 AC084018.2-201ENST00000613093 2607 ntBASIC13.57□□□□□ -0.24
VGLL1Q99990 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
VGLL1Q99990 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 SLC25A1P2-201ENST00000430693 912 ntBASIC13.57□□□□□ -0.24
VGLL1Q99990 AC098590.1-201ENST00000468126 897 ntBASIC13.57□□□□□ -0.24
VGLL1Q99990 AC104390.1-201ENST00000555663 520 ntBASIC13.57□□□□□ -0.24
VGLL1Q99990 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.57□□□□□ -0.24
VGLL1Q99990 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.57□□□□□ -0.24
VGLL1Q99990 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VGLL1Q99990 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
VGLL1Q99990 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
VGLL1Q99990 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
VGLL1Q99990 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
VGLL1Q99990 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VGLL1Q99990 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 AL023806.1-201ENST00000603994 1649 ntBASIC13.57□□□□□ -0.24
VGLL1Q99990 AC008894.3-201ENST00000624324 3103 ntBASIC13.57□□□□□ -0.24
VGLL1Q99990 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VGLL1Q99990 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.56□□□□□ -0.24
VGLL1Q99990 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.56□□□□□ -0.24
VGLL1Q99990 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
VGLL1Q99990 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
VGLL1Q99990 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
VGLL1Q99990 AC100803.2-201ENST00000562459 1963 ntBASIC13.56□□□□□ -0.24
VGLL1Q99990 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VGLL1Q99990 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms