Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 IGHV3-41-201ENST00000613121 348 ntBASIC17.42■□□□□ 0.38
PKP4Q99569 AC124864.1-201ENST00000623408 392 ntBASIC17.42■□□□□ 0.38
PKP4Q99569 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.42■□□□□ 0.38
PKP4Q99569 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PKP4Q99569 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PKP4Q99569 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.42■□□□□ 0.38
PKP4Q99569 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PKP4Q99569 AC012317.2-201ENST00000623305 2251 ntBASIC17.42■□□□□ 0.38
PKP4Q99569 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PKP4Q99569 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PKP4Q99569 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PKP4Q99569 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PKP4Q99569 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PKP4Q99569 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PKP4Q99569 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PKP4Q99569 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PKP4Q99569 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
PKP4Q99569 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
PKP4Q99569 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PKP4Q99569 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.41■□□□□ 0.38
PKP4Q99569 AC090616.6-201ENST00000582640 721 ntBASIC17.41■□□□□ 0.38
PKP4Q99569 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PKP4Q99569 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.41■□□□□ 0.38
PKP4Q99569 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.41■□□□□ 0.38
PKP4Q99569 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PKP4Q99569 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PKP4Q99569 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PKP4Q99569 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.41■□□□□ 0.38
PKP4Q99569 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 AC006116.8-202ENST00000587620 1550 ntBASIC17.4■□□□□ 0.38
PKP4Q99569 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.4■□□□□ 0.38
PKP4Q99569 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.4■□□□□ 0.38
PKP4Q99569 AC134043.2-201ENST00000624206 2238 ntBASIC17.4■□□□□ 0.38
PKP4Q99569 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.4■□□□□ 0.38
PKP4Q99569 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.4■□□□□ 0.38
PKP4Q99569 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.4■□□□□ 0.38
PKP4Q99569 CHCHD2P8-201ENST00000429873 447 ntBASIC17.4■□□□□ 0.38
PKP4Q99569 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.4■□□□□ 0.38
PKP4Q99569 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PKP4Q99569 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.4■□□□□ 0.38
PKP4Q99569 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.4■□□□□ 0.38
PKP4Q99569 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.4■□□□□ 0.38
PKP4Q99569 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PKP4Q99569 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.4■□□□□ 0.38
PKP4Q99569 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PKP4Q99569 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PKP4Q99569 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
PKP4Q99569 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PKP4Q99569 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PKP4Q99569 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PKP4Q99569 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.39■□□□□ 0.37
PKP4Q99569 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PKP4Q99569 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PKP4Q99569 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PKP4Q99569 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PKP4Q99569 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PKP4Q99569 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.39■□□□□ 0.37
PKP4Q99569 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
PKP4Q99569 TSSC2-201ENST00000450217 709 ntBASIC17.39■□□□□ 0.37
PKP4Q99569 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PKP4Q99569 AC091076.1-201ENST00000610741 619 ntBASIC17.39■□□□□ 0.37
PKP4Q99569 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.39■□□□□ 0.37
PKP4Q99569 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.39■□□□□ 0.37
PKP4Q99569 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.39■□□□□ 0.37
PKP4Q99569 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PKP4Q99569 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PKP4Q99569 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms