Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 AL441883.1-201ENST00000566170 1045 ntBASIC13.21□□□□□ -0.29
ODF3Q96PU9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 AC012306.2-201ENST00000609350 630 ntBASIC13.21□□□□□ -0.29
ODF3Q96PU9 AC005363.2-201ENST00000618631 242 ntBASIC13.21□□□□□ -0.29
ODF3Q96PU9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 AC079602.3-201ENST00000623931 403 ntBASIC13.21□□□□□ -0.29
ODF3Q96PU9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF3Q96PU9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ODF3Q96PU9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF3Q96PU9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
ODF3Q96PU9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
ODF3Q96PU9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.21□□□□□ -0.3
ODF3Q96PU9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF3Q96PU9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.21□□□□□ -0.3
ODF3Q96PU9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.21□□□□□ -0.3
ODF3Q96PU9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ODF3Q96PU9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.2□□□□□ -0.3
ODF3Q96PU9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 BX276092.7-203ENST00000637198 1536 ntBASIC13.2□□□□□ -0.3
ODF3Q96PU9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 AL137013.1-201ENST00000432946 1228 ntBASIC13.2□□□□□ -0.3
ODF3Q96PU9 HOMER2P1-201ENST00000455653 964 ntBASIC13.2□□□□□ -0.3
ODF3Q96PU9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 AC010203.1-204ENST00000548782 407 ntBASIC13.2□□□□□ -0.3
ODF3Q96PU9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 AC073912.3-201ENST00000624414 853 ntBASIC13.2□□□□□ -0.3
ODF3Q96PU9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 AC066615.1-201ENST00000640911 628 ntBASIC13.2□□□□□ -0.3
ODF3Q96PU9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF3Q96PU9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF3Q96PU9 KRT8P47-201ENST00000604727 1398 ntBASIC13.2□□□□□ -0.3
ODF3Q96PU9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms