Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 AC036111.1-201ENST00000533973 1582 ntBASIC13.68□□□□□ -0.22
LINC00479Q96M42 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 KRT16P1-201ENST00000399124 1418 ntBASIC13.68□□□□□ -0.22
LINC00479Q96M42 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 AC124016.1-201ENST00000609552 612 ntBASIC13.68□□□□□ -0.22
LINC00479Q96M42 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 AL031985.4-201ENST00000642138 673 ntBASIC13.68□□□□□ -0.22
LINC00479Q96M42 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 AC142086.2-201ENST00000569753 217 ntBASIC13.67□□□□□ -0.22
LINC00479Q96M42 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00479Q96M42 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00479Q96M42 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 AL353708.3-201ENST00000610272 989 ntBASIC13.66□□□□□ -0.22
LINC00479Q96M42 AC110285.5-201ENST00000611501 352 ntBASIC13.66□□□□□ -0.22
LINC00479Q96M42 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms