Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NAPSB-206ENST00000562112 1266 ntBASIC18.93■□□□□ 0.62
CALR3Q96L12 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 AL121761.2-201ENST00000598007 1648 ntBASIC18.92■□□□□ 0.62
CALR3Q96L12 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.92■□□□□ 0.62
CALR3Q96L12 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CALR3Q96L12 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 AC100803.2-201ENST00000562459 1963 ntBASIC18.92■□□□□ 0.62
CALR3Q96L12 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CALR3Q96L12 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.92■□□□□ 0.62
CALR3Q96L12 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.92■□□□□ 0.62
CALR3Q96L12 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CALR3Q96L12 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.92■□□□□ 0.62
CALR3Q96L12 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.92■□□□□ 0.62
CALR3Q96L12 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.92■□□□□ 0.62
CALR3Q96L12 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.92■□□□□ 0.62
CALR3Q96L12 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.92■□□□□ 0.62
CALR3Q96L12 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CALR3Q96L12 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.92■□□□□ 0.62
CALR3Q96L12 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
CALR3Q96L12 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALR3Q96L12 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
CALR3Q96L12 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.91■□□□□ 0.62
CALR3Q96L12 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CALR3Q96L12 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.91■□□□□ 0.62
CALR3Q96L12 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CALR3Q96L12 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.91■□□□□ 0.62
CALR3Q96L12 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.91■□□□□ 0.62
CALR3Q96L12 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.91■□□□□ 0.62
CALR3Q96L12 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.91■□□□□ 0.62
CALR3Q96L12 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CALR3Q96L12 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.91■□□□□ 0.62
CALR3Q96L12 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.91■□□□□ 0.62
CALR3Q96L12 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CALR3Q96L12 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALR3Q96L12 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.9■□□□□ 0.62
CALR3Q96L12 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
CALR3Q96L12 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CALR3Q96L12 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CALR3Q96L12 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.9■□□□□ 0.62
CALR3Q96L12 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms