Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 AC026366.1-201ENST00000488803 879 ntBASIC17.69■□□□□ 0.42
SPDL1Q96EA4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 PP12613-201ENST00000424958 2230 ntBASIC17.69■□□□□ 0.42
SPDL1Q96EA4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPDL1Q96EA4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 AC004951.3-201ENST00000418645 1148 ntBASIC17.68■□□□□ 0.42
SPDL1Q96EA4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 TSPY26P-202ENST00000565928 3884 ntBASIC17.68■□□□□ 0.42
SPDL1Q96EA4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
SPDL1Q96EA4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.67■□□□□ 0.42
SPDL1Q96EA4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPDL1Q96EA4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms