Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 CRYGEP-201ENST00000412192 528 ntBASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 AL589182.2-201ENST00000619332 1049 ntBASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNRNP40Q96DI7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.02■□□□□ 0.15
SNRNP40Q96DI7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNRNP40Q96DI7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNRNP40Q96DI7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNRNP40Q96DI7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
SNRNP40Q96DI7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SNRNP40Q96DI7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNRNP40Q96DI7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.02■□□□□ 0.15
SNRNP40Q96DI7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 ALG1L5P-201ENST00000482043 771 ntBASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.01■□□□□ 0.15
SNRNP40Q96DI7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 AC254562.1-201ENST00000417586 456 ntBASIC16■□□□□ 0.15
SNRNP40Q96DI7 AC103564.2-201ENST00000432853 1299 ntBASIC16■□□□□ 0.15
SNRNP40Q96DI7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 CYMP-203ENST00000474680 1263 ntBASIC16■□□□□ 0.15
SNRNP40Q96DI7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 RFPL4AP1-201ENST00000530883 850 ntBASIC16■□□□□ 0.15
SNRNP40Q96DI7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 AC073592.5-201ENST00000624854 528 ntBASIC16■□□□□ 0.15
SNRNP40Q96DI7 AC092865.6-201ENST00000642101 219 ntBASIC16■□□□□ 0.15
SNRNP40Q96DI7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SNRNP40Q96DI7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNRNP40Q96DI7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SNRNP40Q96DI7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SNRNP40Q96DI7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms