Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS3Q969F9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.81■□□□□ 0.76
HPS3Q969F9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.81■□□□□ 0.76
HPS3Q969F9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.81■□□□□ 0.76
HPS3Q969F9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.81■□□□□ 0.76
HPS3Q969F9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS3Q969F9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS3Q969F9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HPS3Q969F9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HPS3Q969F9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS3Q969F9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.81■□□□□ 0.76
HPS3Q969F9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
HPS3Q969F9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 AC005332.1-201ENST00000577698 1310 ntBASIC19.8■□□□□ 0.76
HPS3Q969F9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.8■□□□□ 0.76
HPS3Q969F9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.8■□□□□ 0.76
HPS3Q969F9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HPS3Q969F9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.8■□□□□ 0.76
HPS3Q969F9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.8■□□□□ 0.76
HPS3Q969F9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HPS3Q969F9 AC011498.5-201ENST00000592027 486 ntBASIC19.8■□□□□ 0.76
HPS3Q969F9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HPS3Q969F9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HPS3Q969F9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HPS3Q969F9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.8■□□□□ 0.76
HPS3Q969F9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HPS3Q969F9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS3Q969F9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.79■□□□□ 0.76
HPS3Q969F9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.79■□□□□ 0.76
HPS3Q969F9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 LTB4R2-202ENST00000528054 3092 ntBASIC19.79■□□□□ 0.76
HPS3Q969F9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.79■□□□□ 0.76
HPS3Q969F9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.79■□□□□ 0.76
HPS3Q969F9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.79■□□□□ 0.76
HPS3Q969F9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.79■□□□□ 0.76
HPS3Q969F9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
HPS3Q969F9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.79■□□□□ 0.76
HPS3Q969F9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS3Q969F9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 TSPY22P-201ENST00000427496 604 ntBASIC19.79■□□□□ 0.76
HPS3Q969F9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS3Q969F9 MTCL1P1-201ENST00000446207 792 ntBASIC19.79■□□□□ 0.76
HPS3Q969F9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS3Q969F9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
HPS3Q969F9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
HPS3Q969F9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.79■□□□□ 0.76
HPS3Q969F9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.79■□□□□ 0.76
HPS3Q969F9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS3Q969F9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS3Q969F9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS3Q969F9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.79■□□□□ 0.76
HPS3Q969F9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS3Q969F9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS3Q969F9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS3Q969F9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HPS3Q969F9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.78■□□□□ 0.76
HPS3Q969F9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.78■□□□□ 0.76
HPS3Q969F9 REXO1L11P-201ENST00000620964 1927 ntBASIC19.78■□□□□ 0.76
HPS3Q969F9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.78■□□□□ 0.76
HPS3Q969F9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HPS3Q969F9 AC139713.2-201ENST00000641328 2723 ntBASIC19.78■□□□□ 0.76
HPS3Q969F9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.78■□□□□ 0.76
HPS3Q969F9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms