Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 EDF1-203ENST00000371649 790 ntTSL 2 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 BAD-202ENST00000394531 631 ntTSL 3 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 MTCL1P1-201ENST00000446207 792 ntBASIC30.49■■■□□ 2.47
TRIM41Q8WV44 PON3-205ENST00000451904 1053 ntTSL 3 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 AC005336.2-201ENST00000593183 939 ntBASIC30.49■■■□□ 2.47
TRIM41Q8WV44 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 VENTXP7-201ENST00000475503 772 ntBASIC30.48■■■□□ 2.47
TRIM41Q8WV44 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
TRIM41Q8WV44 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 AC093010.1-201ENST00000473625 1624 ntBASIC30.47■■■□□ 2.47
TRIM41Q8WV44 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC30.47■■■□□ 2.47
TRIM41Q8WV44 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 FGFR3P6-201ENST00000457012 610 ntBASIC30.46■■■□□ 2.47
TRIM41Q8WV44 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 AC093677.2-201ENST00000600169 1863 ntBASIC30.46■■■□□ 2.47
TRIM41Q8WV44 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
TRIM41Q8WV44 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 SP100-208ENST00000427101 1922 ntTSL 2 BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 Z92544.3-201ENST00000624747 417 ntBASIC30.45■■■□□ 2.47
TRIM41Q8WV44 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC30.45■■■□□ 2.47
TRIM41Q8WV44 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
TRIM41Q8WV44 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
TRIM41Q8WV44 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC30.45■■■□□ 2.46
TRIM41Q8WV44 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
TRIM41Q8WV44 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC30.45■■■□□ 2.46
TRIM41Q8WV44 AC135776.1-201ENST00000319817 2481 ntBASIC30.45■■■□□ 2.46
TRIM41Q8WV44 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TRIM41Q8WV44 AC104581.1-202ENST00000635932 2618 ntBASIC30.44■■■□□ 2.46
TRIM41Q8WV44 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TRIM41Q8WV44 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TRIM41Q8WV44 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TRIM41Q8WV44 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms