Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 AC108860.2-201ENST00000562760 2183 ntBASIC19.12■□□□□ 0.65
LMO3Q8TAP4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 BX276092.7-203ENST00000637198 1536 ntBASIC19.12■□□□□ 0.65
LMO3Q8TAP4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 AL138831.2-201ENST00000606564 490 ntBASIC19.12■□□□□ 0.65
LMO3Q8TAP4 IGHV3-41-201ENST00000613121 348 ntBASIC19.12■□□□□ 0.65
LMO3Q8TAP4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LMO3Q8TAP4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.11■□□□□ 0.65
LMO3Q8TAP4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 AP002383.4-201ENST00000442518 975 ntBASIC19.11■□□□□ 0.65
LMO3Q8TAP4 KRT18P35-201ENST00000510488 1269 ntBASIC19.11■□□□□ 0.65
LMO3Q8TAP4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 AC087388.1-201ENST00000571370 1112 ntBASIC19.11■□□□□ 0.65
LMO3Q8TAP4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LMO3Q8TAP4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 COX5BP2-201ENST00000392354 334 ntBASIC19.1■□□□□ 0.65
LMO3Q8TAP4 CHCHD2P8-201ENST00000429873 447 ntBASIC19.1■□□□□ 0.65
LMO3Q8TAP4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 AP005901.3-202ENST00000581653 237 ntBASIC19.1■□□□□ 0.65
LMO3Q8TAP4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 AL121672.3-201ENST00000608644 468 ntBASIC19.1■□□□□ 0.65
LMO3Q8TAP4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms