Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 AL356309.3-201ENST00000624132 1934 ntBASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 BX276092.7-203ENST00000637198 1536 ntBASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.78■□□□□ 0.92
NEDD1Q8NHV4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 AC019129.2-201ENST00000609837 1235 ntBASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 AL773604.1-201ENST00000617417 272 ntBASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD1Q8NHV4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.77■□□□□ 0.91
NEDD1Q8NHV4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
NEDD1Q8NHV4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.77■□□□□ 0.91
NEDD1Q8NHV4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NEDD1Q8NHV4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 AL353593.2-201ENST00000602529 1483 ntBASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 AF186996.4-201ENST00000467186 377 ntBASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 AC021087.4-201ENST00000563761 564 ntBASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 NKAPP1-205ENST00000585790 367 ntBASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD1Q8NHV4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 AC079776.2-201ENST00000641154 1609 ntBASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 HNRNPDP1-201ENST00000439535 754 ntBASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.75■□□□□ 0.91
NEDD1Q8NHV4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms