Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP38Q8NB14 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.95■□□□□ 0.78
USP38Q8NB14 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP38Q8NB14 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP38Q8NB14 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.95■□□□□ 0.78
USP38Q8NB14 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.95■□□□□ 0.78
USP38Q8NB14 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.95■□□□□ 0.78
USP38Q8NB14 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
USP38Q8NB14 BNIP3P18-201ENST00000593976 575 ntBASIC19.95■□□□□ 0.78
USP38Q8NB14 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP38Q8NB14 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP38Q8NB14 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.95■□□□□ 0.78
USP38Q8NB14 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP38Q8NB14 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
USP38Q8NB14 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
USP38Q8NB14 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
USP38Q8NB14 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.95■□□□□ 0.78
USP38Q8NB14 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.95■□□□□ 0.78
USP38Q8NB14 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.95■□□□□ 0.78
USP38Q8NB14 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
USP38Q8NB14 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.95■□□□□ 0.78
USP38Q8NB14 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP38Q8NB14 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP38Q8NB14 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP38Q8NB14 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.94■□□□□ 0.78
USP38Q8NB14 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
USP38Q8NB14 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP38Q8NB14 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.94■□□□□ 0.78
USP38Q8NB14 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
USP38Q8NB14 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.94■□□□□ 0.78
USP38Q8NB14 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.94■□□□□ 0.78
USP38Q8NB14 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.94■□□□□ 0.78
USP38Q8NB14 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP38Q8NB14 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
USP38Q8NB14 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
USP38Q8NB14 MIR5100-201ENST00000579544 119 ntBASIC19.94■□□□□ 0.78
USP38Q8NB14 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.94■□□□□ 0.78
USP38Q8NB14 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.94■□□□□ 0.78
USP38Q8NB14 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.94■□□□□ 0.78
USP38Q8NB14 AL591684.3-201ENST00000605187 298 ntBASIC19.94■□□□□ 0.78
USP38Q8NB14 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
USP38Q8NB14 AC114341.1-201ENST00000618070 349 ntBASIC19.94■□□□□ 0.78
USP38Q8NB14 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.94■□□□□ 0.78
USP38Q8NB14 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP38Q8NB14 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP38Q8NB14 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP38Q8NB14 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP38Q8NB14 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP38Q8NB14 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP38Q8NB14 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.94■□□□□ 0.78
USP38Q8NB14 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
USP38Q8NB14 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
USP38Q8NB14 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.93■□□□□ 0.78
USP38Q8NB14 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.93■□□□□ 0.78
USP38Q8NB14 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
USP38Q8NB14 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.93■□□□□ 0.78
USP38Q8NB14 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
USP38Q8NB14 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP38Q8NB14 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.93■□□□□ 0.78
USP38Q8NB14 GPX1P2-201ENST00000429271 606 ntBASIC19.93■□□□□ 0.78
USP38Q8NB14 AC244107.1-201ENST00000442033 332 ntBASIC19.93■□□□□ 0.78
USP38Q8NB14 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.93■□□□□ 0.78
USP38Q8NB14 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.93■□□□□ 0.78
USP38Q8NB14 AC139887.3-201ENST00000568585 713 ntBASIC19.93■□□□□ 0.78
USP38Q8NB14 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 ABALON-201ENST00000629058 1903 ntBASIC19.93■□□□□ 0.78
USP38Q8NB14 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.93■□□□□ 0.78
USP38Q8NB14 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP38Q8NB14 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
USP38Q8NB14 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.92■□□□□ 0.78
USP38Q8NB14 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
USP38Q8NB14 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP38Q8NB14 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP38Q8NB14 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
USP38Q8NB14 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
USP38Q8NB14 SDHAP2-201ENST00000455183 2001 ntBASIC19.92■□□□□ 0.78
USP38Q8NB14 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP38Q8NB14 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP38Q8NB14 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP38Q8NB14 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.92■□□□□ 0.78
USP38Q8NB14 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.92■□□□□ 0.78
USP38Q8NB14 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.92■□□□□ 0.78
USP38Q8NB14 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.92■□□□□ 0.78
USP38Q8NB14 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.92■□□□□ 0.78
USP38Q8NB14 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.92■□□□□ 0.78
USP38Q8NB14 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP38Q8NB14 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.92■□□□□ 0.78
USP38Q8NB14 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms