Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 AC009947.1-201ENST00000444350 727 ntBASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 AL139424.1-201ENST00000607572 797 ntBASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SYNPOQ8N3V7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 AC007967.3-201ENST00000434308 558 ntBASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 AC122714.2-201ENST00000502787 707 ntBASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 AC005593.1-201ENST00000624894 515 ntBASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 PMPCAP1-201ENST00000508114 1576 ntBASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNPOQ8N3V7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 AC096633.1-201ENST00000422446 749 ntBASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms