Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 KRT8P47-201ENST00000604727 1398 ntBASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC65Q8IXS2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 PCDHB18P-201ENST00000524813 2368 ntBASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 TSPY22P-201ENST00000427496 604 ntBASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 MTCL1P1-201ENST00000446207 792 ntBASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 AC068472.1-201ENST00000474589 881 ntBASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 AC011498.5-201ENST00000592027 486 ntBASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC65Q8IXS2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC65Q8IXS2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 GUSBP12-201ENST00000513727 720 ntBASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC65Q8IXS2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 AC009949.1-201ENST00000623048 1830 ntBASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms