Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUDCD3Q8IVD9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUDCD3Q8IVD9 AC132938.6-201ENST00000623828 1655 ntBASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 CRYGFP-201ENST00000418459 633 ntBASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NUDCD3Q8IVD9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NUDCD3Q8IVD9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
NUDCD3Q8IVD9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.77■□□□□ 0.43
NUDCD3Q8IVD9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUDCD3Q8IVD9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUDCD3Q8IVD9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUDCD3Q8IVD9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
NUDCD3Q8IVD9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NUDCD3Q8IVD9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
NUDCD3Q8IVD9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUDCD3Q8IVD9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 AC022898.2-201ENST00000616822 1312 ntBASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 LINC00304-203ENST00000565008 1864 ntBASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 NUDT16P1-203ENST00000513809 620 ntBASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 AC104390.1-201ENST00000555663 520 ntBASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 MIR3180-4-201ENST00000582223 153 ntBASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUDCD3Q8IVD9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.75■□□□□ 0.43
NUDCD3Q8IVD9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms