Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 KRT18P41-201ENST00000518924 1277 ntBASIC16.78■□□□□ 0.28
CCDC71Q8IV32 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.78■□□□□ 0.28
CCDC71Q8IV32 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 RCC2P3-201ENST00000418112 1537 ntBASIC16.78■□□□□ 0.28
CCDC71Q8IV32 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 AL450487.1-201ENST00000426799 995 ntBASIC16.77■□□□□ 0.28
CCDC71Q8IV32 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.77■□□□□ 0.28
CCDC71Q8IV32 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC71Q8IV32 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC71Q8IV32 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC71Q8IV32 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC71Q8IV32 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 TPM4P1-201ENST00000436100 807 ntBASIC16.76■□□□□ 0.27
CCDC71Q8IV32 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms