Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 AC106886.4-201ENST00000623557 2502 ntBASIC18.18■□□□□ 0.5
CROCCP2Q86T23 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CROCCP2Q86T23 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP2Q86T23 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.18■□□□□ 0.5
CROCCP2Q86T23 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CROCCP2Q86T23 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP2Q86T23 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP2Q86T23 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CROCCP2Q86T23 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP2Q86T23 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 AL353807.1-201ENST00000427475 662 ntBASIC18.17■□□□□ 0.5
CROCCP2Q86T23 RPS2P4-201ENST00000476944 856 ntBASIC18.17■□□□□ 0.5
CROCCP2Q86T23 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CROCCP2Q86T23 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 AC008040.2-201ENST00000461049 708 ntBASIC18.16■□□□□ 0.5
CROCCP2Q86T23 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 RARRES2P6-201ENST00000567333 442 ntBASIC18.16■□□□□ 0.5
CROCCP2Q86T23 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 AGGF1P2-201ENST00000426656 2106 ntBASIC18.16■□□□□ 0.5
CROCCP2Q86T23 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 PCDHB19P-201ENST00000570871 2371 ntBASIC18.16■□□□□ 0.5
CROCCP2Q86T23 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP2Q86T23 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 AC100803.2-201ENST00000562459 1963 ntBASIC18.15■□□□□ 0.5
CROCCP2Q86T23 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.15■□□□□ 0.5
CROCCP2Q86T23 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.15■□□□□ 0.5
CROCCP2Q86T23 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 AC008687.5-201ENST00000593746 558 ntBASIC18.15■□□□□ 0.5
CROCCP2Q86T23 AC008403.3-201ENST00000598924 454 ntBASIC18.15■□□□□ 0.5
CROCCP2Q86T23 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.15■□□□□ 0.5
CROCCP2Q86T23 AL023875.1-201ENST00000640777 796 ntBASIC18.15■□□□□ 0.5
CROCCP2Q86T23 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.15■□□□□ 0.5
CROCCP2Q86T23 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms