Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 AL031432.2-201ENST00000566714 459 ntBASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 AL928711.1-201ENST00000570165 459 ntBASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 AC018445.3-201ENST00000624177 1945 ntBASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 BCAR1-209ENST00000546196 1340 ntBASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 AC106028.4-201ENST00000614509 607 ntBASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 AC126763.1-201ENST00000552015 2118 ntBASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNKSR3Q6P9H4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 KRT19P2-202ENST00000557173 1012 ntBASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 AC109462.3-201ENST00000573934 613 ntBASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 AC092364.2-202ENST00000597012 1073 ntBASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 AC027612.4-201ENST00000605371 583 ntBASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 GGTLC5P-201ENST00000617623 998 ntBASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.09■□□□□ 0.65
CNKSR3Q6P9H4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.08■□□□□ 0.65
CNKSR3Q6P9H4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNKSR3Q6P9H4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNKSR3Q6P9H4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNKSR3Q6P9H4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNKSR3Q6P9H4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNKSR3Q6P9H4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNKSR3Q6P9H4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 MIR770-201ENST00000390219 98 ntBASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 AP002414.1-201ENST00000391405 1147 ntBASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 PTCHD3P3-201ENST00000403073 906 ntBASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms