Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 UGT1A2P-201ENST00000454886 866 ntBASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AC092364.2-202ENST00000597012 1073 ntBASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 Z92544.3-201ENST00000624747 417 ntBASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AC015911.4-201ENST00000588022 1070 ntBASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AC004877.2-201ENST00000623941 599 ntBASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 LINC00982-205ENST00000420957 435 ntBASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 DUTP2-201ENST00000519164 463 ntBASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 AC190387.1-201ENST00000551683 408 ntBASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 PGM5P2-202ENST00000637225 1043 ntBASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13DQ5THJ4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 TSEN15P1-201ENST00000423257 515 ntBASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 AC073592.3-201ENST00000625118 1834 ntBASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 AP002414.1-201ENST00000391405 1147 ntBASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 MRPS18AP1-201ENST00000414458 589 ntBASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 AC051619.7-201ENST00000568314 623 ntBASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms