Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 TERF1P1-201ENST00000311003 1181 ntBASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 AP000593.1-201ENST00000393668 712 ntBASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 ATP5G1P1-201ENST00000448724 379 ntBASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 AC010203.1-204ENST00000548782 407 ntBASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 AL031432.5-201ENST00000641059 760 ntBASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ATPAF1Q5TC12 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 AC022211.2-201ENST00000585075 2527 ntBASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms