Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 WASH4P-201ENST00000564273 1246 ntBASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 MIR4722-201ENST00000578292 60 ntBASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 AC016629.1-201ENST00000596579 586 ntBASIC19.89■□□□□ 0.77
COL13A1Q5TAT6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 ANKRD19P-201ENST00000338192 862 ntBASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL13A1Q5TAT6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL13A1Q5TAT6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 TMEM14DP-201ENST00000422205 345 ntBASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 AC008494.3-201ENST00000606615 944 ntBASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 CASP16P-204ENST00000635032 809 ntBASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.86■□□□□ 0.77
COL13A1Q5TAT6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 AKAP8P1-201ENST00000434743 1349 ntBASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 MIR149-201ENST00000384879 89 ntBASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 ALG1L8P-201ENST00000533887 760 ntBASIC19.85■□□□□ 0.77
COL13A1Q5TAT6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms