Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RUNDC3AQ59EK9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 NKILA-202ENST00000614771 2598 ntBASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 REXO1L11P-201ENST00000620964 1927 ntBASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.9■□□□□ 0.3
RUNDC3AQ59EK9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.89■□□□□ 0.3
RUNDC3AQ59EK9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RUNDC3AQ59EK9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
RUNDC3AQ59EK9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RUNDC3AQ59EK9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 TSPY14P-201ENST00000303979 915 ntBASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 C2orf69P3-201ENST00000565542 1120 ntBASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 AC116407.2-201ENST00000613639 860 ntBASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 AC124067.4-201ENST00000519691 2379 ntBASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RUNDC3AQ59EK9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 INGX-201ENST00000359239 846 ntBASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 MIR1238-201ENST00000408483 83 ntBASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 MIR3917-201ENST00000580971 93 ntBASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
RUNDC3AQ59EK9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms