Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.68■□□□□ 0.9
HERVK_113P62684 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HERVK_113P62684 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.68■□□□□ 0.9
HERVK_113P62684 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.68■□□□□ 0.9
HERVK_113P62684 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.68■□□□□ 0.9
HERVK_113P62684 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.68■□□□□ 0.9
HERVK_113P62684 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.68■□□□□ 0.9
HERVK_113P62684 AC055717.3-201ENST00000622967 595 ntBASIC20.68■□□□□ 0.9
HERVK_113P62684 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HERVK_113P62684 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.68■□□□□ 0.9
HERVK_113P62684 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.68■□□□□ 0.9
HERVK_113P62684 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HERVK_113P62684 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 AC007967.3-201ENST00000434308 558 ntBASIC20.67■□□□□ 0.9
HERVK_113P62684 KRT18P3-201ENST00000451602 1288 ntBASIC20.67■□□□□ 0.9
HERVK_113P62684 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.67■□□□□ 0.9
HERVK_113P62684 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.67■□□□□ 0.9
HERVK_113P62684 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.67■□□□□ 0.9
HERVK_113P62684 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.67■□□□□ 0.9
HERVK_113P62684 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.67■□□□□ 0.9
HERVK_113P62684 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.67■□□□□ 0.9
HERVK_113P62684 AL691403.2-201ENST00000618460 490 ntBASIC20.67■□□□□ 0.9
HERVK_113P62684 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.67■□□□□ 0.9
HERVK_113P62684 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.67■□□□□ 0.9
HERVK_113P62684 AP002414.3-201ENST00000589352 1468 ntBASIC20.67■□□□□ 0.9
HERVK_113P62684 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
HERVK_113P62684 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
HERVK_113P62684 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HERVK_113P62684 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HERVK_113P62684 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERVK_113P62684 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.66■□□□□ 0.9
HERVK_113P62684 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERVK_113P62684 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERVK_113P62684 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
HERVK_113P62684 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HERVK_113P62684 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HERVK_113P62684 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERVK_113P62684 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERVK_113P62684 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.66■□□□□ 0.9
HERVK_113P62684 UPF3AP3-201ENST00000420996 769 ntBASIC20.66■□□□□ 0.9
HERVK_113P62684 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.66■□□□□ 0.9
HERVK_113P62684 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.66■□□□□ 0.9
HERVK_113P62684 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.66■□□□□ 0.9
HERVK_113P62684 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.66■□□□□ 0.9
HERVK_113P62684 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.66■□□□□ 0.9
HERVK_113P62684 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERVK_113P62684 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.66■□□□□ 0.9
HERVK_113P62684 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERVK_113P62684 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.66■□□□□ 0.9
HERVK_113P62684 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.66■□□□□ 0.9
HERVK_113P62684 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.66■□□□□ 0.9
HERVK_113P62684 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERVK_113P62684 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HERVK_113P62684 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HERVK_113P62684 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERVK_113P62684 AC005332.8-201ENST00000622750 2735 ntBASIC20.65■□□□□ 0.9
HERVK_113P62684 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERVK_113P62684 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.65■□□□□ 0.9
HERVK_113P62684 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
HERVK_113P62684 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HERVK_113P62684 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HERVK_113P62684 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HERVK_113P62684 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.65■□□□□ 0.9
HERVK_113P62684 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERVK_113P62684 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERVK_113P62684 AC097374.2-201ENST00000618617 1306 ntBASIC20.65■□□□□ 0.9
HERVK_113P62684 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERVK_113P62684 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.65■□□□□ 0.9
HERVK_113P62684 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.65■□□□□ 0.9
HERVK_113P62684 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.65■□□□□ 0.9
HERVK_113P62684 UNC93B6-202ENST00000528242 690 ntBASIC20.65■□□□□ 0.9
HERVK_113P62684 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.65■□□□□ 0.9
HERVK_113P62684 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.65■□□□□ 0.9
HERVK_113P62684 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERVK_113P62684 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HERVK_113P62684 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HERVK_113P62684 AC132938.6-201ENST00000623828 1655 ntBASIC20.64■□□□□ 0.9
HERVK_113P62684 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HERVK_113P62684 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HERVK_113P62684 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.64■□□□□ 0.9
HERVK_113P62684 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms