Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH6P55285 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH6P55285 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH6P55285 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH6P55285 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH6P55285 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CDH6P55285 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDH6P55285 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH6P55285 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH6P55285 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH6P55285 TSPY12P-201ENST00000421279 868 ntBASIC18.62■□□□□ 0.57
CDH6P55285 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.62■□□□□ 0.57
CDH6P55285 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH6P55285 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
CDH6P55285 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.62■□□□□ 0.57
CDH6P55285 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.62■□□□□ 0.57
CDH6P55285 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH6P55285 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH6P55285 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH6P55285 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDH6P55285 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH6P55285 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH6P55285 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH6P55285 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH6P55285 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDH6P55285 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH6P55285 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.61■□□□□ 0.57
CDH6P55285 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH6P55285 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.61■□□□□ 0.57
CDH6P55285 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDH6P55285 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH6P55285 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH6P55285 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CDH6P55285 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH6P55285 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CDH6P55285 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CDH6P55285 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH6P55285 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CDH6P55285 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH6P55285 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CDH6P55285 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH6P55285 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH6P55285 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH6P55285 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH6P55285 GPR32P1-201ENST00000601788 811 ntBASIC18.6■□□□□ 0.57
CDH6P55285 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.6■□□□□ 0.57
CDH6P55285 AC083849.1-201ENST00000615227 514 ntBASIC18.6■□□□□ 0.57
CDH6P55285 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH6P55285 AC009154.2-201ENST00000621177 724 ntBASIC18.6■□□□□ 0.57
CDH6P55285 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH6P55285 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH6P55285 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH6P55285 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH6P55285 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH6P55285 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CDH6P55285 AL353692.3-201ENST00000407031 1396 ntBASIC18.59■□□□□ 0.57
CDH6P55285 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH6P55285 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH6P55285 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH6P55285 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CDH6P55285 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH6P55285 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH6P55285 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH6P55285 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms