Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC1P35251 KRT18P65-201ENST00000439811 1286 ntBASIC18.87■□□□□ 0.61
RFC1P35251 FAM210CP-201ENST00000445714 574 ntBASIC18.87■□□□□ 0.61
RFC1P35251 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.87■□□□□ 0.61
RFC1P35251 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC1P35251 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC1P35251 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC1P35251 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.87■□□□□ 0.61
RFC1P35251 LINC01238-205ENST00000567549 1107 ntBASIC18.87■□□□□ 0.61
RFC1P35251 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RFC1P35251 RNF126P1-202ENST00000569893 925 ntBASIC18.87■□□□□ 0.61
RFC1P35251 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC1P35251 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.87■□□□□ 0.61
RFC1P35251 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RFC1P35251 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
RFC1P35251 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RFC1P35251 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFC1P35251 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC1P35251 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC1P35251 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RFC1P35251 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 AL353692.3-201ENST00000407031 1396 ntBASIC18.86■□□□□ 0.61
RFC1P35251 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RFC1P35251 AC022898.2-201ENST00000616822 1312 ntBASIC18.86■□□□□ 0.61
RFC1P35251 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RFC1P35251 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC1P35251 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.86■□□□□ 0.61
RFC1P35251 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC1P35251 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC1P35251 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.86■□□□□ 0.61
RFC1P35251 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFC1P35251 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC1P35251 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC1P35251 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RFC1P35251 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC1P35251 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC1P35251 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.85■□□□□ 0.61
RFC1P35251 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC1P35251 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.85■□□□□ 0.61
RFC1P35251 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.85■□□□□ 0.61
RFC1P35251 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC1P35251 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.85■□□□□ 0.61
RFC1P35251 AC005332.3-201ENST00000589904 676 ntBASIC18.85■□□□□ 0.61
RFC1P35251 GPR32P1-201ENST00000601788 811 ntBASIC18.85■□□□□ 0.61
RFC1P35251 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.85■□□□□ 0.61
RFC1P35251 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFC1P35251 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.85■□□□□ 0.61
RFC1P35251 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFC1P35251 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.84■□□□□ 0.61
RFC1P35251 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
RFC1P35251 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.84■□□□□ 0.61
RFC1P35251 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
RFC1P35251 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.84■□□□□ 0.61
RFC1P35251 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC1P35251 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.84■□□□□ 0.61
RFC1P35251 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.84■□□□□ 0.61
RFC1P35251 AL049597.2-201ENST00000565575 961 ntBASIC18.84■□□□□ 0.61
RFC1P35251 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
RFC1P35251 AL390719.2-201ENST00000606993 987 ntBASIC18.84■□□□□ 0.61
RFC1P35251 AC009154.2-201ENST00000621177 724 ntBASIC18.84■□□□□ 0.61
RFC1P35251 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.84■□□□□ 0.61
RFC1P35251 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms