Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA3P22001 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNA3P22001 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA3P22001 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA3P22001 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA3P22001 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.77■■□□□ 1.08
KCNA3P22001 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNA3P22001 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA3P22001 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
KCNA3P22001 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA3P22001 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.77■■□□□ 1.08
KCNA3P22001 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNA3P22001 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.77■■□□□ 1.08
KCNA3P22001 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.77■■□□□ 1.08
KCNA3P22001 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.77■■□□□ 1.08
KCNA3P22001 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA3P22001 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA3P22001 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA3P22001 AC012645.4-201ENST00000610691 1061 ntBASIC21.77■■□□□ 1.08
KCNA3P22001 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
KCNA3P22001 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.77■■□□□ 1.08
KCNA3P22001 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNA3P22001 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNA3P22001 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
KCNA3P22001 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
KCNA3P22001 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.77■■□□□ 1.07
KCNA3P22001 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KCNA3P22001 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KCNA3P22001 AC092919.2-201ENST00000623631 1645 ntBASIC21.77■■□□□ 1.07
KCNA3P22001 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA3P22001 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
KCNA3P22001 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
KCNA3P22001 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA3P22001 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
KCNA3P22001 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA3P22001 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNA3P22001 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA3P22001 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA3P22001 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
KCNA3P22001 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
KCNA3P22001 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNA3P22001 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNA3P22001 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.76■■□□□ 1.07
KCNA3P22001 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA3P22001 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNA3P22001 AC005225.4-201ENST00000557330 545 ntBASIC21.76■■□□□ 1.07
KCNA3P22001 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA3P22001 GGTLC5P-201ENST00000617623 998 ntBASIC21.76■■□□□ 1.07
KCNA3P22001 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA3P22001 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
KCNA3P22001 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
KCNA3P22001 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.76■■□□□ 1.07
KCNA3P22001 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.76■■□□□ 1.07
KCNA3P22001 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA3P22001 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNA3P22001 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KCNA3P22001 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNA3P22001 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
KCNA3P22001 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA3P22001 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA3P22001 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNA3P22001 AC236430.1-201ENST00000402231 743 ntBASIC21.75■■□□□ 1.07
KCNA3P22001 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNA3P22001 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNA3P22001 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA3P22001 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KCNA3P22001 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA3P22001 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.75■■□□□ 1.07
KCNA3P22001 AC093214.1-201ENST00000511688 1107 ntBASIC21.75■■□□□ 1.07
KCNA3P22001 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.75■■□□□ 1.07
KCNA3P22001 RN7SL204P-201ENST00000582831 262 ntBASIC21.75■■□□□ 1.07
KCNA3P22001 AC068137.2-201ENST00000605408 478 ntBASIC21.75■■□□□ 1.07
KCNA3P22001 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.75■■□□□ 1.07
KCNA3P22001 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA3P22001 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNA3P22001 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA3P22001 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.75■■□□□ 1.07
KCNA3P22001 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA3P22001 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA3P22001 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNA3P22001 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNA3P22001 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA3P22001 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA3P22001 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNA3P22001 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA3P22001 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA3P22001 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA3P22001 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
KCNA3P22001 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
KCNA3P22001 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNA3P22001 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA3P22001 PMS2P4-201ENST00000412466 1052 ntBASIC21.74■■□□□ 1.07
KCNA3P22001 KLF4P1-201ENST00000412782 1185 ntBASIC21.74■■□□□ 1.07
KCNA3P22001 AC002472.2-201ENST00000442739 958 ntBASIC21.74■■□□□ 1.07
KCNA3P22001 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.74■■□□□ 1.07
KCNA3P22001 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA3P22001 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNA3P22001 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
KCNA3P22001 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNA3P22001 AL353135.1-201ENST00000606729 504 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms