Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FAM58CP-201ENST00000435741 640 ntBASIC31.03■■■□□ 2.56
TOP2AP11388 CEND1P1-201ENST00000451006 455 ntBASIC31.03■■■□□ 2.56
TOP2AP11388 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC31.03■■■□□ 2.56
TOP2AP11388 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC31.03■■■□□ 2.56
TOP2AP11388 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
TOP2AP11388 AC009949.1-201ENST00000623048 1830 ntBASIC31.03■■■□□ 2.56
TOP2AP11388 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TOP2AP11388 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TOP2AP11388 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TOP2AP11388 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
TOP2AP11388 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TOP2AP11388 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TOP2AP11388 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
TOP2AP11388 ACTG1P4-201ENST00000425123 1122 ntBASIC31.03■■■□□ 2.56
TOP2AP11388 AL645939.2-201ENST00000427340 991 ntBASIC31.03■■■□□ 2.56
TOP2AP11388 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC31.03■■■□□ 2.56
TOP2AP11388 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
TOP2AP11388 SPCS2P1-201ENST00000561636 679 ntBASIC31.03■■■□□ 2.56
TOP2AP11388 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC31.03■■■□□ 2.56
TOP2AP11388 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TOP2AP11388 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
TOP2AP11388 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
TOP2AP11388 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
TOP2AP11388 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
TOP2AP11388 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
TOP2AP11388 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
TOP2AP11388 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TOP2AP11388 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC31.02■■■□□ 2.56
TOP2AP11388 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TOP2AP11388 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TOP2AP11388 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
TOP2AP11388 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC31.02■■■□□ 2.56
TOP2AP11388 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
TOP2AP11388 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC31.02■■■□□ 2.56
TOP2AP11388 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
TOP2AP11388 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC31.02■■■□□ 2.56
TOP2AP11388 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC31.02■■■□□ 2.56
TOP2AP11388 AC068137.2-201ENST00000605408 478 ntBASIC31.02■■■□□ 2.56
TOP2AP11388 AC093028.1-201ENST00000622998 982 ntBASIC31.02■■■□□ 2.56
TOP2AP11388 AL513210.1-201ENST00000629608 234 ntBASIC31.02■■■□□ 2.56
TOP2AP11388 AC092902.6-201ENST00000641783 218 ntBASIC31.02■■■□□ 2.56
TOP2AP11388 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
TOP2AP11388 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC31.01■■■□□ 2.56
TOP2AP11388 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
TOP2AP11388 BCAR1-209ENST00000546196 1340 ntBASIC31.01■■■□□ 2.56
TOP2AP11388 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
TOP2AP11388 AC093677.2-201ENST00000600169 1863 ntBASIC31.01■■■□□ 2.56
TOP2AP11388 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC31.01■■■□□ 2.55
TOP2AP11388 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
TOP2AP11388 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC31.01■■■□□ 2.55
TOP2AP11388 CBR1-202ENST00000399191 838 ntTSL 3 BASIC31.01■■■□□ 2.55
TOP2AP11388 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC31.01■■■□□ 2.55
TOP2AP11388 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC31.01■■■□□ 2.55
TOP2AP11388 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC31.01■■■□□ 2.55
TOP2AP11388 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC31.01■■■□□ 2.55
TOP2AP11388 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TOP2AP11388 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC31■■■□□ 2.55
TOP2AP11388 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC31■■■□□ 2.55
TOP2AP11388 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC31■■■□□ 2.55
TOP2AP11388 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC31■■■□□ 2.55
TOP2AP11388 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TOP2AP11388 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TOP2AP11388 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC31■■■□□ 2.55
TOP2AP11388 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
TOP2AP11388 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TOP2AP11388 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
TOP2AP11388 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TOP2AP11388 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC30.99■■■□□ 2.55
TOP2AP11388 LINC00982-205ENST00000420957 435 ntBASIC30.99■■■□□ 2.55
TOP2AP11388 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
TOP2AP11388 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC30.99■■■□□ 2.55
TOP2AP11388 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC30.99■■■□□ 2.55
TOP2AP11388 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
TOP2AP11388 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
TOP2AP11388 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC30.99■■■□□ 2.55
TOP2AP11388 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
TOP2AP11388 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC30.99■■■□□ 2.55
TOP2AP11388 POR-209ENST00000439269 1858 ntTSL 2 BASIC30.99■■■□□ 2.55
TOP2AP11388 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC30.99■■■□□ 2.55
TOP2AP11388 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
TOP2AP11388 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC30.99■■■□□ 2.55
TOP2AP11388 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC30.98■■■□□ 2.55
TOP2AP11388 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC30.98■■■□□ 2.55
TOP2AP11388 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC30.98■■■□□ 2.55
TOP2AP11388 GGTLC5P-201ENST00000617623 998 ntBASIC30.98■■■□□ 2.55
TOP2AP11388 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
TOP2AP11388 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
TOP2AP11388 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
TOP2AP11388 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TOP2AP11388 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
TOP2AP11388 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TOP2AP11388 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TOP2AP11388 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC30.98■■■□□ 2.55
TOP2AP11388 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC30.97■■■□□ 2.55
TOP2AP11388 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC30.97■■■□□ 2.55
TOP2AP11388 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC30.97■■■□□ 2.55
TOP2AP11388 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TOP2AP11388 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TOP2AP11388 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC30.97■■■□□ 2.55
TOP2AP11388 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms