Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PDGFAP04085 PMS2P7-201ENST00000506558 1336 ntBASIC16.72■□□□□ 0.27
PDGFAP04085 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.72■□□□□ 0.27
PDGFAP04085 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.72■□□□□ 0.27
PDGFAP04085 HEIH-201ENST00000623091 1652 ntBASIC16.72■□□□□ 0.27
PDGFAP04085 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 MTMR9LP-203ENST00000426597 1545 ntBASIC16.72■□□□□ 0.27
PDGFAP04085 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.72■□□□□ 0.27
PDGFAP04085 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PDGFAP04085 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.72■□□□□ 0.27
PDGFAP04085 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.72■□□□□ 0.27
PDGFAP04085 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.72■□□□□ 0.27
PDGFAP04085 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDGFAP04085 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.72■□□□□ 0.27
PDGFAP04085 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDGFAP04085 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.72■□□□□ 0.27
PDGFAP04085 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.72■□□□□ 0.27
PDGFAP04085 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.72■□□□□ 0.27
PDGFAP04085 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.72■□□□□ 0.27
PDGFAP04085 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PDGFAP04085 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.72■□□□□ 0.27
PDGFAP04085 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.72■□□□□ 0.27
PDGFAP04085 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PDGFAP04085 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFAP04085 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PDGFAP04085 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PDGFAP04085 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 NOC2LP2-201ENST00000407594 1944 ntBASIC16.71■□□□□ 0.27
PDGFAP04085 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.71■□□□□ 0.27
PDGFAP04085 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PDGFAP04085 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 BX842568.4-201ENST00000421222 227 ntBASIC16.71■□□□□ 0.27
PDGFAP04085 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.71■□□□□ 0.27
PDGFAP04085 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.71■□□□□ 0.27
PDGFAP04085 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.71■□□□□ 0.27
PDGFAP04085 AC116407.3-201ENST00000623905 1129 ntBASIC16.71■□□□□ 0.27
PDGFAP04085 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PDGFAP04085 AC135050.7-201ENST00000624508 2218 ntBASIC16.71■□□□□ 0.27
PDGFAP04085 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDGFAP04085 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PDGFAP04085 TP73-AS1-210ENST00000637775 1455 ntBASIC16.71■□□□□ 0.27
PDGFAP04085 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PDGFAP04085 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.71■□□□□ 0.27
PDGFAP04085 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.7■□□□□ 0.26
PDGFAP04085 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
PDGFAP04085 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 AIRN-201ENST00000601203 4374 ntBASIC16.7■□□□□ 0.26
PDGFAP04085 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.7■□□□□ 0.26
PDGFAP04085 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDGFAP04085 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.7■□□□□ 0.26
PDGFAP04085 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.7■□□□□ 0.26
PDGFAP04085 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms