Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALDH1A1P00352 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.83
ALDH1A1P00352 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ALDH1A1P00352 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ALDH1A1P00352 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ALDH1A1P00352 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
ALDH1A1P00352 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.26■□□□□ 0.83
ALDH1A1P00352 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALDH1A1P00352 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 CNN2P2-201ENST00000443536 909 ntBASIC20.25■□□□□ 0.83
ALDH1A1P00352 CNN2P3-201ENST00000450201 906 ntBASIC20.25■□□□□ 0.83
ALDH1A1P00352 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 DUX4L27-201ENST00000554796 1261 ntBASIC20.25■□□□□ 0.83
ALDH1A1P00352 AL136317.3-201ENST00000618497 906 ntBASIC20.25■□□□□ 0.83
ALDH1A1P00352 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 AL158211.5-201ENST00000623583 2518 ntBASIC20.25■□□□□ 0.83
ALDH1A1P00352 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.25■□□□□ 0.83
ALDH1A1P00352 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALDH1A1P00352 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 AL627223.1-201ENST00000416693 442 ntBASIC20.24■□□□□ 0.83
ALDH1A1P00352 GAPDHP21-201ENST00000450301 1010 ntBASIC20.24■□□□□ 0.83
ALDH1A1P00352 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALDH1A1P00352 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 AL499627.1-201ENST00000569373 2188 ntBASIC20.24■□□□□ 0.83
ALDH1A1P00352 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ALDH1A1P00352 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms