Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.96■□□□□ 0.47
RFPL1O75677 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFPL1O75677 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFPL1O75677 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
RFPL1O75677 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFPL1O75677 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFPL1O75677 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RFPL1O75677 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RFPL1O75677 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.96■□□□□ 0.47
RFPL1O75677 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.96■□□□□ 0.47
RFPL1O75677 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFPL1O75677 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RFPL1O75677 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RFPL1O75677 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RFPL1O75677 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
RFPL1O75677 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.95■□□□□ 0.46
RFPL1O75677 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.95■□□□□ 0.46
RFPL1O75677 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.95■□□□□ 0.46
RFPL1O75677 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.95■□□□□ 0.46
RFPL1O75677 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.95■□□□□ 0.46
RFPL1O75677 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.95■□□□□ 0.46
RFPL1O75677 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.95■□□□□ 0.46
RFPL1O75677 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.95■□□□□ 0.46
RFPL1O75677 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.95■□□□□ 0.46
RFPL1O75677 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RFPL1O75677 AL031432.5-201ENST00000641059 760 ntBASIC17.95■□□□□ 0.46
RFPL1O75677 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RFPL1O75677 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.95■□□□□ 0.46
RFPL1O75677 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
RFPL1O75677 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RFPL1O75677 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.95■□□□□ 0.46
RFPL1O75677 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.95■□□□□ 0.46
RFPL1O75677 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
RFPL1O75677 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFPL1O75677 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RFPL1O75677 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.94■□□□□ 0.46
RFPL1O75677 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
RFPL1O75677 AC084018.2-201ENST00000613093 2607 ntBASIC17.94■□□□□ 0.46
RFPL1O75677 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFPL1O75677 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RFPL1O75677 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.94■□□□□ 0.46
RFPL1O75677 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.94■□□□□ 0.46
RFPL1O75677 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.94■□□□□ 0.46
RFPL1O75677 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.94■□□□□ 0.46
RFPL1O75677 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
RFPL1O75677 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.94■□□□□ 0.46
RFPL1O75677 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 LINC00304-203ENST00000565008 1864 ntBASIC17.94■□□□□ 0.46
RFPL1O75677 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RFPL1O75677 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RFPL1O75677 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFPL1O75677 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFPL1O75677 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RFPL1O75677 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.93■□□□□ 0.46
RFPL1O75677 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.93■□□□□ 0.46
RFPL1O75677 AC138932.1-201ENST00000534164 6830 ntBASIC17.93■□□□□ 0.46
RFPL1O75677 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFPL1O75677 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.93■□□□□ 0.46
RFPL1O75677 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.93■□□□□ 0.46
RFPL1O75677 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFPL1O75677 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFPL1O75677 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFPL1O75677 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.93■□□□□ 0.46
RFPL1O75677 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms