Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 DDT-204ENST00000404092 805 ntTSL 3 BASIC7.91□□□□□ -1.14
USH2AO75445 NAA38-206ENST00000576384 424 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC7.91□□□□□ -1.14
USH2AO75445 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC7.91□□□□□ -1.14
USH2AO75445 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
USH2AO75445 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 AC006116.8-202ENST00000587620 1550 ntBASIC7.91□□□□□ -1.14
USH2AO75445 ADM-208ENST00000534464 1640 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC7.9□□□□□ -1.14
USH2AO75445 USP39-204ENST00000409766 2033 ntTSL 2 BASIC7.9□□□□□ -1.14
USH2AO75445 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC7.9□□□□□ -1.14
USH2AO75445 ELK2AP-201ENST00000392510 1007 ntBASIC7.9□□□□□ -1.14
USH2AO75445 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC7.9□□□□□ -1.14
USH2AO75445 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC7.9□□□□□ -1.14
USH2AO75445 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC7.9□□□□□ -1.14
USH2AO75445 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.14
USH2AO75445 REXO1L6P-201ENST00000603433 1515 ntBASIC7.9□□□□□ -1.14
USH2AO75445 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
USH2AO75445 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
USH2AO75445 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC7.9□□□□□ -1.14
USH2AO75445 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC7.9□□□□□ -1.14
USH2AO75445 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC7.9□□□□□ -1.14
USH2AO75445 KRT8P47-201ENST00000604727 1398 ntBASIC7.9□□□□□ -1.14
USH2AO75445 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 AL592309.1-201ENST00000443127 649 ntBASIC7.9□□□□□ -1.14
USH2AO75445 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC7.9□□□□□ -1.14
USH2AO75445 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC7.9□□□□□ -1.14
USH2AO75445 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC7.9□□□□□ -1.14
USH2AO75445 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
USH2AO75445 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC7.9□□□□□ -1.14
USH2AO75445 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 AC125437.2-201ENST00000625180 2167 ntBASIC7.9□□□□□ -1.14
USH2AO75445 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC7.9□□□□□ -1.14
USH2AO75445 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC7.9□□□□□ -1.14
USH2AO75445 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
USH2AO75445 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USH2AO75445 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC7.9□□□□□ -1.14
USH2AO75445 AL353135.1-201ENST00000606729 504 ntBASIC7.9□□□□□ -1.14
USH2AO75445 AL158211.5-201ENST00000623583 2518 ntBASIC7.9□□□□□ -1.15
USH2AO75445 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
USH2AO75445 AL049757.1-201ENST00000616842 1596 ntBASIC7.9□□□□□ -1.15
USH2AO75445 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
USH2AO75445 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC7.9□□□□□ -1.15
USH2AO75445 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
USH2AO75445 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC7.9□□□□□ -1.15
USH2AO75445 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
USH2AO75445 AC005237.2-201ENST00000434368 219 ntBASIC7.9□□□□□ -1.15
USH2AO75445 SPCS2P4-201ENST00000436160 681 ntBASIC7.9□□□□□ -1.15
USH2AO75445 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC7.9□□□□□ -1.15
USH2AO75445 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC7.9□□□□□ -1.15
USH2AO75445 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC7.9□□□□□ -1.15
USH2AO75445 AL805961.1-202ENST00000641562 540 ntBASIC7.9□□□□□ -1.15
USH2AO75445 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
USH2AO75445 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
USH2AO75445 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
USH2AO75445 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.15
USH2AO75445 AC010460.3-201ENST00000511359 1579 ntBASIC7.9□□□□□ -1.15
USH2AO75445 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC7.9□□□□□ -1.15
USH2AO75445 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC7.9□□□□□ -1.15
USH2AO75445 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC7.89□□□□□ -1.15
USH2AO75445 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC7.89□□□□□ -1.15
USH2AO75445 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 BCYRN1-201ENST00000418539 200 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms