Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
SDCBPO00560 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDCBPO00560 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.24■□□□□ 0.03
SDCBPO00560 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDCBPO00560 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDCBPO00560 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.24■□□□□ 0.03
SDCBPO00560 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.24■□□□□ 0.03
SDCBPO00560 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDCBPO00560 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.24■□□□□ 0.03
SDCBPO00560 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDCBPO00560 AC009102.3-201ENST00000623118 1491 ntBASIC15.24■□□□□ 0.03
SDCBPO00560 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.24■□□□□ 0.03
SDCBPO00560 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SDCBPO00560 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.24■□□□□ 0.03
SDCBPO00560 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDCBPO00560 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDCBPO00560 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
SDCBPO00560 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SDCBPO00560 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDCBPO00560 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDCBPO00560 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDCBPO00560 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SDCBPO00560 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.23■□□□□ 0.03
SDCBPO00560 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.23■□□□□ 0.03
SDCBPO00560 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 AL163051.1-201ENST00000569214 1512 ntBASIC15.23■□□□□ 0.03
SDCBPO00560 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SDCBPO00560 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SDCBPO00560 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.23■□□□□ 0.03
SDCBPO00560 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.23■□□□□ 0.03
SDCBPO00560 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
SDCBPO00560 AC007663.1-201ENST00000438948 1240 ntBASIC15.23■□□□□ 0.03
SDCBPO00560 AC128688.1-201ENST00000487626 519 ntBASIC15.23■□□□□ 0.03
SDCBPO00560 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.23■□□□□ 0.03
SDCBPO00560 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.23■□□□□ 0.03
SDCBPO00560 AP001094.4-201ENST00000579008 2176 ntBASIC15.23■□□□□ 0.03
SDCBPO00560 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SDCBPO00560 AC092338.2-201ENST00000568827 1415 ntBASIC15.23■□□□□ 0.03
SDCBPO00560 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.23■□□□□ 0.03
SDCBPO00560 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDCBPO00560 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
SDCBPO00560 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 AL355312.1-201ENST00000407115 2176 ntBASIC15.22■□□□□ 0.03
SDCBPO00560 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SDCBPO00560 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.22■□□□□ 0.03
SDCBPO00560 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SDCBPO00560 AC093010.1-201ENST00000473625 1624 ntBASIC15.22■□□□□ 0.03
SDCBPO00560 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SDCBPO00560 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SDCBPO00560 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.22■□□□□ 0.03
SDCBPO00560 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SDCBPO00560 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SDCBPO00560 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.22■□□□□ 0.03
SDCBPO00560 KRT18P23-201ENST00000435622 1283 ntBASIC15.22■□□□□ 0.03
SDCBPO00560 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.22■□□□□ 0.03
SDCBPO00560 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.22■□□□□ 0.03
SDCBPO00560 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.22■□□□□ 0.03
SDCBPO00560 NAPSB-206ENST00000562112 1266 ntBASIC15.22■□□□□ 0.03
SDCBPO00560 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.22■□□□□ 0.03
SDCBPO00560 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
SDCBPO00560 CR769767.2-201ENST00000622735 460 ntBASIC15.22■□□□□ 0.03
SDCBPO00560 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.22■□□□□ 0.03
SDCBPO00560 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SDCBPO00560 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.22■□□□□ 0.03
SDCBPO00560 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SDCBPO00560 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SDCBPO00560 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms