Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PENK-208ENST00000523051 772 ntTSL 5 BASIC26.33■■□□□ 1.81
HFM1A2PYH4 NKAPP1-205ENST00000585790 367 ntBASIC26.33■■□□□ 1.81
HFM1A2PYH4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
HFM1A2PYH4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC26.33■■□□□ 1.81
HFM1A2PYH4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC26.33■■□□□ 1.81
HFM1A2PYH4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC26.33■■□□□ 1.81
HFM1A2PYH4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC26.33■■□□□ 1.81
HFM1A2PYH4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC26.33■■□□□ 1.81
HFM1A2PYH4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
HFM1A2PYH4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.8
HFM1A2PYH4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
HFM1A2PYH4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HFM1A2PYH4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
HFM1A2PYH4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HFM1A2PYH4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HFM1A2PYH4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 AF186996.4-201ENST00000467186 377 ntBASIC26.32■■□□□ 1.8
HFM1A2PYH4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 AL049840.3-201ENST00000602669 611 ntBASIC26.32■■□□□ 1.8
HFM1A2PYH4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HFM1A2PYH4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
HFM1A2PYH4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
HFM1A2PYH4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
HFM1A2PYH4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 AC243591.1-201ENST00000452967 1364 ntBASIC26.32■■□□□ 1.8
HFM1A2PYH4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HFM1A2PYH4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
HFM1A2PYH4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
HFM1A2PYH4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HFM1A2PYH4 AC003669.1-201ENST00000334569 611 ntBASIC26.31■■□□□ 1.8
HFM1A2PYH4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HFM1A2PYH4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 MOK-208ENST00000519058 917 ntTSL 2 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
HFM1A2PYH4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HFM1A2PYH4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
HFM1A2PYH4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
HFM1A2PYH4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 AC008764.6-201ENST00000595909 2069 ntBASIC26.31■■□□□ 1.8
HFM1A2PYH4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HFM1A2PYH4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HFM1A2PYH4 AL031284.1-201ENST00000419297 478 ntBASIC26.31■■□□□ 1.8
HFM1A2PYH4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 AP001005.1-201ENST00000571755 1248 ntBASIC26.31■■□□□ 1.8
HFM1A2PYH4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
HFM1A2PYH4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC26.31■■□□□ 1.8
HFM1A2PYH4 FAM215A-202ENST00000632077 792 ntBASIC26.31■■□□□ 1.8
HFM1A2PYH4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
HFM1A2PYH4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
HFM1A2PYH4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
HFM1A2PYH4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
HFM1A2PYH4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HFM1A2PYH4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HFM1A2PYH4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC26.3■■□□□ 1.8
HFM1A2PYH4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
HFM1A2PYH4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
HFM1A2PYH4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
HFM1A2PYH4 RNPS1P1-201ENST00000507437 918 ntBASIC26.3■■□□□ 1.8
HFM1A2PYH4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC26.3■■□□□ 1.8
HFM1A2PYH4 AC109462.3-201ENST00000573934 613 ntBASIC26.3■■□□□ 1.8
HFM1A2PYH4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC26.3■■□□□ 1.8
HFM1A2PYH4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC26.29■■□□□ 1.8
HFM1A2PYH4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
HFM1A2PYH4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
HFM1A2PYH4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC26.29■■□□□ 1.8
HFM1A2PYH4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
HFM1A2PYH4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC26.29■■□□□ 1.8
HFM1A2PYH4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC26.29■■□□□ 1.8
HFM1A2PYH4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
HFM1A2PYH4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
HFM1A2PYH4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
HFM1A2PYH4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms