Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 KRT18P23-201ENST00000435622 1283 ntBASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 AL353719.1-201ENST00000566847 864 ntBASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 CR769767.2-201ENST00000622735 460 ntBASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 TMEM191A-211ENST00000637163 1067 ntBASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RNF103-CHMP3A0A140T963 AL163051.1-201ENST00000569214 1512 ntBASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC009102.3-201ENST00000623118 1491 ntBASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 MIR1238-201ENST00000408483 83 ntBASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 SNORA78-201ENST00000459373 127 ntBASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 FITM1-202ENST00000559294 800 ntBASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 PP12613-201ENST00000424958 2230 ntBASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 HOXB1-202ENST00000577092 1414 ntBASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF103-CHMP3A0A140T963 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC092338.2-201ENST00000568827 1415 ntBASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 MIR149-201ENST00000384879 89 ntBASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 BX088651.1-201ENST00000540551 451 ntBASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms