Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC093458.2-201ENST00000623150 629 ntBASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV5-4A0A0C4DH59 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC122714.2-201ENST00000502787 707 ntBASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC009533.2-201ENST00000543664 586 ntBASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC012615.1-201ENST00000565797 1299 ntBASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC092329.2-201ENST00000598402 547 ntBASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 LINC00896-202ENST00000609602 2128 ntBASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 NSUN5P1-202ENST00000421140 1535 ntBASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 NSUN5P2-203ENST00000457352 1529 ntBASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV5-4A0A0C4DH59 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 BNIP3P18-201ENST00000593976 575 ntBASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC011467.2-201ENST00000598425 242 ntBASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 HLA-J-201ENST00000462773 1622 ntBASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV5-4A0A0C4DH59 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms