Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 CROCCP2-202ENST00000412962 2773 ntBASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 KRT18P65-201ENST00000439811 1286 ntBASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 AC024563.2-201ENST00000603282 481 ntBASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHA3Q9Y5H8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 AC034232.1-201ENST00000506026 1064 ntBASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA3Q9Y5H8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 DDX43P3-201ENST00000441064 443 ntBASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA3Q9Y5H8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 KRT8P47-201ENST00000604727 1398 ntBASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHA3Q9Y5H8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms