Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB1Q9Y5G3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGB1Q9Y5G3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGB1Q9Y5G3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 AC106886.4-201ENST00000623557 2502 ntBASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 SNORA78-201ENST00000459373 127 ntBASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 AC091390.4-202ENST00000476426 537 ntBASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 AC008403.3-201ENST00000598924 454 ntBASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 AC010331.1-201ENST00000611423 582 ntBASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 AC093010.1-201ENST00000473625 1624 ntBASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB1Q9Y5G3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 AC239809.2-201ENST00000415381 517 ntBASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 NIFKP9-201ENST00000419265 221 ntBASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 CKBP1-201ENST00000565489 1086 ntBASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 AC069544.1-201ENST00000609399 999 ntBASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 CICP6-201ENST00000457191 2729 ntBASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 DOC2GP-204ENST00000639052 2548 ntBASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB1Q9Y5G3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB1Q9Y5G3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB1Q9Y5G3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms