Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB2Q9Y5E7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB2Q9Y5E7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB2Q9Y5E7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 AC112698.1-201ENST00000510299 916 ntBASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB2Q9Y5E7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 TP73-AS1-207ENST00000624167 988 ntBASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 AC132938.6-201ENST00000623828 1655 ntBASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB2Q9Y5E7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 AP000347.1-202ENST00000435868 847 ntBASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHB2Q9Y5E7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms