Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.56■□□□□ 0.88
PNMA3Q9UL41 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PNMA3Q9UL41 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PNMA3Q9UL41 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PNMA3Q9UL41 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 AC018445.3-201ENST00000624177 1945 ntBASIC20.55■□□□□ 0.88
PNMA3Q9UL41 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 AP006288.1-201ENST00000446065 395 ntBASIC20.55■□□□□ 0.88
PNMA3Q9UL41 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.55■□□□□ 0.88
PNMA3Q9UL41 AC010460.3-201ENST00000511359 1579 ntBASIC20.55■□□□□ 0.88
PNMA3Q9UL41 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.54■□□□□ 0.88
PNMA3Q9UL41 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.53■□□□□ 0.88
PNMA3Q9UL41 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 MCCD1P2-201ENST00000423228 335 ntBASIC20.53■□□□□ 0.88
PNMA3Q9UL41 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PNMA3Q9UL41 ANO7L1-203ENST00000602586 1720 ntBASIC20.53■□□□□ 0.88
PNMA3Q9UL41 AC005082.1-201ENST00000413042 2259 ntBASIC20.52■□□□□ 0.88
PNMA3Q9UL41 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 AC002310.6-201ENST00000624451 1377 ntBASIC20.52■□□□□ 0.88
PNMA3Q9UL41 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 AC004817.3-201ENST00000602957 2129 ntBASIC20.52■□□□□ 0.88
PNMA3Q9UL41 AC073592.5-201ENST00000624854 528 ntBASIC20.52■□□□□ 0.88
PNMA3Q9UL41 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PNMA3Q9UL41 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 AL020989.1-201ENST00000422979 469 ntBASIC20.51■□□□□ 0.87
PNMA3Q9UL41 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.51■□□□□ 0.87
PNMA3Q9UL41 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms